Welcome to SENSE-PPI documentation!

SENSE-PPI is a Deep Learning model for predicting physical protein-protein interactions based on amino acid sequences. It is based on embeddings generated by ESM2 and uses Siamese RNN architecture to perform a binary classification.

Note

This project is under active development.

Contents

• Installation
• Usage
  • Quick start
  • List of commands
  • Predict
  • Test
  • Train
  • Predict_string
  • Create_dataset